Here in Chautauqua County, extreme western NY, friends along the NY/PA border have told me that the State has put in large steel boxes, asking hunters to leave the heads of harvested deer for testing. I've not heard of any numbers or percentages of infection but we know it's here. DEC is telling us to bone out the deer for consumption, do not freeze or save the spine/head or any bones.
On a different note, I was stunned to learn of a 4 state study, NY, PA and 2 others I can't remember. They said that the deer herds in these states were 30-40% positive for Covid-19! Wonderful! They cautioned us not to handle the lungs, wear gloves and to thoroughly disinfect knives used to field dress. This is taking a lot of the fun out of hunting for me.