I have multiple rifles with patent breeches, both .50 and .54 cal, and both cap and flint.
I load and fire all day, ignoring the fact that the demon patent breech lurks within the breech end of my barrels.
When I clean, I use the same hot soapy water routine, with plain water rinse, and WD-40 spray to remove residual moisture, that I've used for several decades. I do have a slotted .22 rod tip that I use with a large flannel patch to mop out the patent breech. Other than that, the patent breeches receive no other special treatment, and I've never seen any residual fouling after my cleanings.
I'm speculating, but there may be folks with a dose of patentbreechaphobia who are simply attributing more problems than actually exist.